Our Packages
A suite of interoperable tools for R and Python.
Ibex
Co-embedding BCR amino acid sequences and RNA Expression.
devtools::install_github("BorchLab/Ibex")immApex
Immune Receptor API for Machine and Deep Learning
devtools::install_github("BorchLab/immapex")immLynx
R interface for state-of-the-art Python tools for TCR/BCR modeling.
devtools::install_github("BorchLab/immlynx")Moose
De novo discovery of sequence motifs in TCR and antibody repertoires using R.
devtools::install_github("BorchLab/moose")scRepertoire
Single-cell immune receptor analysis toolkit for R
devtools::install_github("BorchLab/scRepertoire")Trex
Co-embedding TCR amino acid sequences and RNA Expression.
devtools::install_github("BorchLab/Trex")