Publications
Our team's research and contributions to the field.
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scRepertoire 2: Enhanced and efficient toolkit for single-cell immune profiling
Qile Yang, Ksenia R. Safina, Kieu Diem Quynh Nguyen, Zewen Kelvin Tuong, Nicholas Borcherding
PLOS Computational Biology (2025)
DOI: 10.1371/journal.pcbi.1012760 -
Single-cell immune repertoire analysis
Sergio E. Irac, Megan Sioe Fei Soon, Nicholas Borcherding, Zewen Kelvin Tuong
Nature Methods (2024)
DOI: 10.1038/s41592-024-02243-4 -
CD4+ T cells exhibit distinct transcriptional phenotypes in the lymph nodes and blood following mRNA vaccination in humans
Nicholas Borcherding, Wooseob Kim, Michael Quinn, Fangjie Han, Julian Q. Zhou, Alexandria J. Sturtz, Aaron J. Schmitz, Tingting Lei, Stefan A. Schattgen, Michael K. Klebert, et al.
Nature Immunology (2024)
DOI: 10.1038/s41590-024-01888-9 -
SARS-CoV-2 mRNA vaccination elicits a robust and persistent T follicular helper cell response in humans
Philip A. Mudd, Anastasia A. Minervina, Mikhail V. Pogorelyy, Jackson S. Turner, Wooseob Kim, Elizaveta Kalaidina, Jan Petersen, Aaron J. Schmitz, Tingting Lei, Ali H. Ellebedy, et al.
Cell (2022)
DOI: 10.1016/j.cell.2021.12.026 -
Autoimmunity-associated T cell receptors recognize HLA-B*27-bound peptides
Xinbo Yang, Lee I. Garner, Ivan V. Zvyagin, Michael A. Paley, Ekaterina A. Komech, Kevin M. Jude, Xiang Zhao, Ricardo A. Fernandes, et al.
Nature (2022)
DOI: 10.1038/s41586-022-05501-7